Transcript: lnc-PARN-8:1

Basic information

LNCipedia transcript ID: lnc-PARN-8:1 
LNCipedia gene ID: lnc-PARN-8
Ensembl Gene ID: ENSG00000262267
Ensembl Transcript ID: ENST00000576944
Location (hg38): chr16:13730254-13779760
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 566 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000576944.1; U95743.1-003; OTTHUMT00000436399.1; NONHSAT140651
Alternative gene names: ENSG00000262267.1; U95743.1; OTTHUMG00000177354.1; ENSG00000262267.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -27.0273 non-coding 
CPAT coding probability 9.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PARN-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PARN-8:1
4.0 lnc-PARN-8:1
4.1 lnc-PARN-8:1
5.0 lnc-PARN-8:1
5.1 lnc-PARN-8:1
5.2 lnc-PARN-8:1