Transcript: lnc-PARP1-5:1

Basic information

LNCipedia transcript ID: lnc-PARP1-5:1 
LNCipedia gene ID: lnc-PARP1-5
Location (hg38): chr1:226662211-226662828
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 513 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000096613.1|FTMT20100077797.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -173.8734 non-coding 
CPAT coding probability 0.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PARP1-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PARP1-5:1
5.0 lnc-PARP1-5:1
5.1 lnc-PARP1-5:1
5.2 lnc-PARP1-5:1