Transcript: lnc-PARP16-1:1

Basic information

LNCipedia transcript ID: lnc-PARP16-1:1 
LNCipedia gene ID: lnc-PARP16-1
Location (hg38): chr15:65226472-65226697
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 226 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000578884.1; RP11-628M2.1-001; OTTHUMT00000421968.1; NONHSAT046712
Alternative gene names: ENSG00000264287.1; RP11-628M2.1; OTTHUMG00000173058.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 3.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PARP16-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PARP16-1:1
4.0 lnc-PARP16-1:1
4.1 lnc-PARP16-1:1
5.0 lnc-PARP16-1:1
5.1 lnc-TIPIN-35:1
5.2 lnc-PARP16-1:1