Transcript: lnc-PARVG-4:2

Basic information

LNCipedia transcript ID: lnc-PARVG-4:2 
LNCipedia gene ID: lnc-PARVG-4
Location (hg38): chr22:44385280-44389441
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4162 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: l_2286_NR_027240
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.6839 non-coding 
CPAT coding probability 23.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PARVG-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP1-32I10.10.1-4:1
4.0 lnc-RP1-32I10.10.1-4:1
4.1 lnc-RP1-32I10.10.1-4:1
5.0 lnc-RP1-32I10.10.1-4:1
5.1 lnc-FBLN1-24:1
5.2 lnc-PARVG-4:2