Transcript: lnc-PAWR-14:1

Basic information

LNCipedia transcript ID: lnc-PAWR-14:1 
LNCipedia gene ID: lnc-PAWR-14
Ensembl Gene ID: ENSG00000277130
Ensembl Transcript ID: ENST00000619055
Location (hg38): chr12:79818784-79819465
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 682 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000619055.1
Alternative gene names: ENSG00000277130.1; RP11-530C5.4; AC073569.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -194.851 non-coding 
CPAT coding probability 0.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PAWR-14:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-PAWR-14:1
4.1 lnc-PAWR-14:1
5.0 lnc-PAWR-14:1
5.1 lnc-CCDC59-20:1
5.2 lnc-PAWR-14:1