Transcript: lnc-PAX6-2:3

Basic information

LNCipedia transcript ID: lnc-PAX6-2:3 
LNCipedia gene ID: lnc-PAX6-2
Location (hg38): chr11:32040070-32041460
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 344 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT018643
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -253.4606 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PAX6-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PAX6-2:3
4.0 lnc-PAX6-2:3
4.1 lnc-PAX6-2:3
5.0 lnc-PAX6-2:3
5.1 lnc-CSTF3-14:1
5.2 lnc-PAX6-2:3