Transcript: lnc-PAX6-2:4

Basic information

LNCipedia transcript ID: lnc-PAX6-2:4 
LNCipedia gene ID: lnc-PAX6-2
Location (hg38): chr11:32040070-32041381
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 582 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT018644
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -229.2698 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PAX6-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PAX6-2:4
4.0 lnc-PAX6-2:4
4.1 lnc-PAX6-2:4
5.0 lnc-PAX6-2:4
5.1 lnc-CSTF3-14:4
5.2 lnc-PAX6-2:4