Transcript: lnc-PCDH20-17:1

Basic information

LNCipedia transcript ID: lnc-PCDH20-17:1 
LNCipedia gene ID: lnc-PCDH20-17
Location (hg38): chr13:62565683-62636019
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 415 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT034148
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.1835 non-coding 
CPAT coding probability 1.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PCDH20-17:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCDH20-17:1
4.0 lnc-PCDH20-17:1
4.1 lnc-PCDH20-17:1
5.0 lnc-PCDH20-17:1
5.1 lnc-CCDC169-237:1
5.2 lnc-PCDH20-17:1