Transcript: lnc-PCED1B-5:9

Basic information

LNCipedia transcript ID: lnc-PCED1B-5:9 
LNCipedia gene ID: lnc-PCED1B-5
Location (hg38): chr12:46383679-46652554
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 537 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT027867
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -126.4487 non-coding 
CPAT coding probability 3.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PCED1B-5:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARID2-3:12
4.0 lnc-FAM113B-5:8
4.1 lnc-FAM113B-5:8
5.0 lnc-FAM113B-5:8
5.1 lnc-PCED1B-16:9
5.2 lnc-PCED1B-5:9