Transcript: lnc-PCNX1-2:1

Basic information

LNCipedia transcript ID: lnc-PCNX1-2:1 
LNCipedia gene ID: lnc-PCNX1-2
Location (hg38): chr14:70809885-70816021
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1145 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA384:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -47.4669 non-coding 
CPAT coding probability 2.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PCNX1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-PCNX-2:5
4.1 lnc-PCNX-2:5
5.0 lnc-PCNX-2:5
5.1 lnc-ACOT2-40:1
5.2 lnc-PCNX1-2:1