Transcript: lnc-PCP4-3:1

Basic information

LNCipedia transcript ID: lnc-PCP4-3:1 
LNCipedia gene ID: lnc-PCP4-3
Location (hg38): chr21:40155054-40155516
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 463 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT082218
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -145.7202 non-coding 
CPAT coding probability 0.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PCP4-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCP4-3:1
4.0 lnc-PCP4-3:1
4.1 lnc-PCP4-3:1
5.0 lnc-PCP4-3:1
5.1 lnc-PDE9A-60:1
5.2 lnc-PCP4-3:1