Transcript: lnc-PCSK7-5:1

Basic information

LNCipedia transcript ID: lnc-PCSK7-5:1 
LNCipedia gene ID: lnc-PCSK7-5
Ensembl Gene ID: ENSG00000276505
Ensembl Transcript ID: ENST00000613535
Location (hg38): chr11:117297005-117297328
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 324 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000613535.1
Alternative gene names: ENSG00000276505.1; CMB9-94B1.2; AP000892.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PCSK7-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AP000892.4.1-5:1
4.1 lnc-AP000892.4.1-5:1
5.0 lnc-AP000892.4.1-5:1
5.1 lnc-SCN4B-29:1
5.2 lnc-PCSK7-5:1