Transcript: lnc-PDE3B-6:1

Basic information

LNCipedia transcript ID: lnc-PDE3B-6:1 
LNCipedia gene ID: lnc-PDE3B-6
Location (hg38): chr11:14520502-14529157
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5042 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000001619.1|ENCT00000064586.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 40.4054 non-coding 
CPAT coding probability 0.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PDE3B-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PDE3B-6:1
5.0 lnc-PDE3B-6:1
5.1 lnc-NUCB2-28:1
5.2 lnc-PDE3B-6:1