Transcript: lnc-PDE4D-7:3

Basic information

LNCipedia transcript ID: lnc-PDE4D-7:3 
LNCipedia gene ID: lnc-PDE4D-7
Location (hg38): chr5:58457494-58458573
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 580 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT101608
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -67.4165 non-coding 
CPAT coding probability 1.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PDE4D-7:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTD-2117L12.1.1-4:3
4.0 lnc-CTD-2117L12.1.1-4:3
4.1 lnc-CTD-2117L12.1.1-4:3
5.0 lnc-CTD-2117L12.1.1-4:3
5.1 lnc-ACTBL2-15:3
5.2 lnc-PDE4D-7:3