Transcript: lnc-PDE4D-7:5

Basic information

LNCipedia transcript ID: lnc-PDE4D-7:5 
LNCipedia gene ID: lnc-PDE4D-7
Location (hg38): chr5:58456743-58457421
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 591 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT101606
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1107.5175 coding 
CPAT coding probability 9.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PDE4D-7:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTD-2117L12.1.1-4:5
4.0 lnc-CTD-2117L12.1.1-4:5
4.1 lnc-CTD-2117L12.1.1-4:5
5.0 lnc-CTD-2117L12.1.1-4:5
5.1 lnc-ACTBL2-15:5
5.2 lnc-PDE4D-7:5