Transcript: lnc-PDGFA-12:1

Basic information

LNCipedia transcript ID: lnc-PDGFA-12:1 
LNCipedia gene ID: lnc-PDGFA-12
Location (hg38): chr7:45934-59133
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 934 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT118566
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.0435 non-coding 
CPAT coding probability 0.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PDGFA-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC145676.2.1-12:1
4.0 lnc-AC145676.2.1-12:1
4.1 lnc-AC145676.2.1-12:1
5.0 lnc-AC145676.2.1-12:1
5.1 lnc-PRKAR1B-24:1
5.2 lnc-PDGFA-12:1