Transcript: lnc-PDGFA-13:1

Basic information

LNCipedia transcript ID: lnc-PDGFA-13:1 
LNCipedia gene ID: lnc-PDGFA-13
Location (hg38): chr7:43232-86697
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2097 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT118565
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.1401 non-coding 
CPAT coding probability 61.60% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PDGFA-13:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC145676.2.1-13:3
4.0 lnc-AC145676.2.1-13:3
4.1 lnc-AC145676.2.1-13:3
5.0 lnc-AC145676.2.1-13:3
5.1 lnc-PRKAR1B-25:1
5.2 lnc-PDGFA-13:1