Transcript: lnc-PDGFA-17:20

Basic information

LNCipedia transcript ID: lnc-PDGFA-17:20 
LNCipedia gene ID: lnc-PDGFA-17
RefSeq ID: NR_134325
Location (hg38): chr7:144444-149438
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 565 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134325.1
Alternative gene names: LOC102723672


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 56.2359 non-coding 
CPAT coding probability 7.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PDGFA-17:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-PRKAR1B-17:20
5.1 lnc-PRKAR1B-17:20
5.2 lnc-PDGFA-17:20