Transcript: lnc-PDGFA-17:8

Basic information

LNCipedia transcript ID: lnc-PDGFA-17:8 
LNCipedia gene ID: lnc-PDGFA-17
Location (hg38): chr7:144941-149459
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2724 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT118591
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 35.214 non-coding 
CPAT coding probability 3.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PDGFA-17:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC145676.2.1-4:13
4.0 lnc-AC145676.2.1-4:13
4.1 lnc-AC145676.2.1-4:13
5.0 lnc-AC145676.2.1-4:13
5.1 lnc-PRKAR1B-17:8
5.2 lnc-PDGFA-17:8