Transcript: lnc-PDGFA-4:1

Basic information

LNCipedia transcript ID: lnc-PDGFA-4:1 
LNCipedia gene ID: lnc-PDGFA-4
Location (hg38): chr7:161791-165341
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3266 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT118610
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.2969 non-coding 
CPAT coding probability 10.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PDGFA-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC145676.2.1-3:2
4.0 lnc-AC145676.2.1-3:2
4.1 lnc-AC145676.2.1-3:2
5.0 lnc-AC145676.2.1-3:2
5.1 lnc-PRKAR1B-16:1
5.2 lnc-PDGFA-4:1