Transcript: lnc-PDGFD-1:17

Basic information

LNCipedia transcript ID: lnc-PDGFD-1:17 
LNCipedia gene ID: lnc-PDGFD-1
Location (hg38): chr11:103610970-103700640
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 658 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000006805.1|MICT00000066589.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -21.7921 non-coding 
CPAT coding probability 0.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PDGFD-1:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PDGFD-1:17
5.0 lnc-PDGFD-1:17
5.1 lnc-DCUN1D5-8:16
5.2 lnc-PDGFD-1:17