Transcript: lnc-PDILT-1:2

Basic information

LNCipedia transcript ID: lnc-PDILT-1:2 
LNCipedia gene ID: lnc-PDILT-1
Ensembl Gene ID: ENSG00000262995
Ensembl Transcript ID: ENST00000574654
Location (hg38): chr16:20440266-20441518
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 341 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000574654.1; CTD-2194A8.2-002; OTTHUMT00000438526.1; NONHSAT140926
Alternative gene names: ENSG00000262995.1; CTD-2194A8.2; OTTHUMG00000177693.1; AC137056.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -129.4949 non-coding 
CPAT coding probability 0.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PDILT-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PDILT-1:2
4.0 lnc-PDILT-1:2
4.1 lnc-PDILT-1:2
5.0 lnc-PDILT-1:2
5.1 lnc-MARF1-64:3
5.2 lnc-PDILT-1:2