Transcript: lnc-PDK2-5:1

Basic information

LNCipedia transcript ID: lnc-PDK2-5:1 
LNCipedia gene ID: lnc-PDK2-5
Ensembl Gene ID: ENSG00000276851
Ensembl Transcript ID: ENST00000612365
Location (hg38): chr17:50094065-50094647
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 583 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000612365.1
Alternative gene names: ENSG00000276851.1; RP5-875H18.9; AC002401.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -122.5998 non-coding 
CPAT coding probability 8.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PDK2-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-PDK2-5:1
4.1 lnc-PDK2-5:1
5.0 lnc-PDK2-5:1
5.1 lnc-ACSF2-18:1
5.2 lnc-PDK2-5:1