Transcript: lnc-PDLIM3-6:7

Basic information

LNCipedia transcript ID: lnc-PDLIM3-6:7 
LNCipedia gene ID: lnc-PDLIM3-6
Location (hg38): chr4:185678430-185811852
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 567 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT099623
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -266.4244 non-coding 
CPAT coding probability 11.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PDLIM3-6:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PDLIM3-6:7
4.0 lnc-PDLIM3-6:7
4.1 lnc-PDLIM3-6:7
5.0 lnc-PDLIM3-6:7
5.1 lnc-MTNR1A-11:7
5.2 lnc-PDLIM3-6:7