Transcript: lnc-PEA15-1:7

Basic information

LNCipedia transcript ID: lnc-PEA15-1:7 
LNCipedia gene ID: lnc-PEA15-1
Ensembl Gene ID: ENSG00000228606
Ensembl Transcript ID: ENST00000642063
Location (hg38): chr1:160262015-160262720
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 584 bp
Exons: 2
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000642063.1
Alternative gene names: ENSG00000228606.2; AL139011.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -73.5401 non-coding 
CPAT coding probability 0.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PEA15-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-ATP1A2-3:6
5.1 lnc-ATP1A2-3:6
5.2 lnc-PEA15-1:7