Transcript: lnc-PEPD-6:1

Basic information

LNCipedia transcript ID: lnc-PEPD-6:1 
LNCipedia gene ID: lnc-PEPD-6
Location (hg38): chr19:34022656-34023427
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 772 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT064276
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.3187 non-coding 
CPAT coding probability 29.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PEPD-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPS4XP21-3:1
4.0 lnc-RPS4XP21-3:1
4.1 lnc-RPS4XP21-3:1
5.0 lnc-RPS4XP21-3:1
5.1 lnc-SCGB2B2-33:1
5.2 lnc-PEPD-6:1