Transcript: lnc-PERP-1:2

Basic information

LNCipedia transcript ID: lnc-PERP-1:2 
LNCipedia gene ID: lnc-PERP-1
Location (hg38): chr6:137941024-137957625
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2816 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000226004.1|MICT00000312285.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -88.5927 non-coding 
CPAT coding probability 1.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PERP-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PERP-1:2
5.0 lnc-PERP-1:2
5.1 lnc-OLIG3-12:1
5.2 lnc-PERP-1:2