Transcript: lnc-PERP-2:10

Basic information

LNCipedia transcript ID: lnc-PERP-2:10 
LNCipedia gene ID: lnc-PERP-2
Location (hg38): chr6:137865387-137870327
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2592 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_3271_chr6:138186523-138191464_placenta
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -150.4578 non-coding 
CPAT coding probability 1.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PERP-2:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PERP-10:1
4.0 lnc-PERP-10:1
4.1 lnc-PERP-2:10
5.0 lnc-PERP-2:10
5.1 lnc-OLIG3-2:7
5.2 lnc-PERP-2:10