Transcript: lnc-PERP-2:21

Basic information

LNCipedia transcript ID: lnc-PERP-2:21 
LNCipedia gene ID: lnc-PERP-2
Location (hg38): chr6:137855523-137867744
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2886 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000237499.2|FTMT22100065673.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.4297 non-coding 
CPAT coding probability 12.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PERP-2:21 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PERP-2:21
5.0 lnc-PERP-2:21
5.1 lnc-OLIG3-2:21
5.2 lnc-PERP-2:21