Transcript: lnc-PERP-2:8

Basic information

LNCipedia transcript ID: lnc-PERP-2:8 
LNCipedia gene ID: lnc-PERP-2
Location (hg38): chr6:137823694-137827035
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 999 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012793; NONHSAT115184
Alternative gene names: XLOC_005849; linc-OLIG3-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -166.6452 non-coding 
CPAT coding probability 0.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PERP-2:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PERP-3:1
3.1 lnc-PERP-3:1
4.0 lnc-PERP-2:8
4.1 lnc-PERP-2:8
5.0 lnc-PERP-2:8
5.1 lnc-OLIG3-2:41
5.2 lnc-PERP-2:8