Transcript: lnc-PEX7-1:2

Basic information

LNCipedia transcript ID: lnc-PEX7-1:2 
LNCipedia gene ID: lnc-PEX7-1
RefSeq ID: NR_125858
Location (hg38): chr6:136629114-136648198
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 762 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125858; NR_125858.1
Alternative gene names: LOC101928461


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -72.006 non-coding 
CPAT coding probability 1.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PEX7-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PEX7-1:2
4.0 lnc-PEX7-1:2
4.1 lnc-PEX7-1:2
5.0 lnc-PEX7-1:2
5.1 lnc-TBPL1-53:6
5.2 lnc-PEX7-1:2