Transcript: lnc-PEX7-1:7

Basic information

LNCipedia transcript ID: lnc-PEX7-1:7 
LNCipedia gene ID: lnc-PEX7-1
Location (hg38): chr6:136594195-136648507
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1344 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000234263.1|MICT00000312054.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -72.006 non-coding 
CPAT coding probability 0.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PEX7-1:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PEX7-1:7
5.0 lnc-PEX7-1:7
5.1 lnc-TBPL1-53:5
5.2 lnc-PEX7-1:7