Transcript: lnc-PEX7-2:5

Basic information

LNCipedia transcript ID: lnc-PEX7-2:5 
LNCipedia gene ID: lnc-PEX7-2
Location (hg38): chr6:136550664-136552554
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1891 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272189.1|ENST00000607749.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -106.6876 non-coding 
CPAT coding probability 4.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PEX7-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PEX7-2:5
5.0 lnc-PEX7-2:5
5.1 lnc-TBPL1-50:3
5.2 lnc-PEX7-2:5