Transcript: lnc-PFDN4-8:2

Basic information

LNCipedia transcript ID: lnc-PFDN4-8:2 
LNCipedia gene ID: lnc-PFDN4-8
Location (hg38): chr20:53923162-53924713
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1552 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236352.1|ENCT00000262666.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -8.3177 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PFDN4-8:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PFDN4-8:2
5.0 lnc-PFDN4-8:2
5.1 lnc-MC3R-28:2
5.2 lnc-PFDN4-8:2