Transcript: lnc-PFKFB3-453:5

Basic information

LNCipedia transcript ID: lnc-PFKFB3-453:5 
LNCipedia gene ID: lnc-PFKFB3-453
Location (hg38): chr10:6331255-6332738
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1290 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018098; NONHSAT011224
Alternative gene names: XLOC_008367; linc-ITIH2-13


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 19.983 non-coding 
CPAT coding probability 3.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PFKFB3-453:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AL137145.1-1:2
3.1 lnc-AL137145.1-1:2
4.0 lnc-AL137145.2-1:5
4.1 lnc-AL137145.2-1:5
5.0 lnc-AL137145.2-1:5
5.1 lnc-NPY4R2-453:5
5.2 lnc-PFKFB3-453:5