Transcript: lnc-PFKFB3-4:1

Basic information

LNCipedia transcript ID: lnc-PFKFB3-4:1 
LNCipedia gene ID: lnc-PFKFB3-4
Location (hg38): chr10:6786708-6801865
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6646 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT011262; FPKM1_group_2870_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.2759 non-coding 
CPAT coding probability 3.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PFKFB3-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL137145.1-6:8
4.0 LINC00707:6
4.1 LINC00707:6
5.0 LINC00707:6
5.1 lnc-NPY4R2-445:1
5.2 lnc-PFKFB3-4:1