Transcript: lnc-PFKFB3-9:1

Basic information

LNCipedia transcript ID: lnc-PFKFB3-9:1 
LNCipedia gene ID: lnc-PFKFB3-9
Location (hg38): chr10:6658721-6661955
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 545 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_254_chr10:6700682-6703917_adrenal
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -155.4074 non-coding 
CPAT coding probability 11.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PFKFB3-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL137145.1-9:1
4.0 lnc-AL137145.1-9:1
4.1 lnc-AL137145.1-9:1
5.0 lnc-AL137145.1-9:1
5.1 lnc-NPY4R2-447:1
5.2 lnc-PFKFB3-9:1