Transcript: lnc-PFKP-11:1

Basic information

LNCipedia transcript ID: lnc-PFKP-11:1 
LNCipedia gene ID: lnc-PFKP-11
Location (hg38): chr10:3318695-3749474
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 949 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00017697; NONHSAT139948
Alternative gene names: XLOC_008349; linc-AKR1E2-14


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -195.2974 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PFKP-11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PFKP-10:1
3.1 lnc-PFKP-11:1
4.0 lnc-PFKP-11:1
4.1 lnc-PFKP-11:1
5.0 lnc-PFKP-11:1
5.1 lnc-NPY4R2-519:1
5.2 lnc-PFKP-11:1