Transcript: lnc-PGGHG-1:13

Basic information

LNCipedia transcript ID: lnc-PGGHG-1:13 
LNCipedia gene ID: lnc-PGGHG-1
Location (hg38): chr11:288130-288978
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 573 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000255026.1|ENST00000525217.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 24.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PGGHG-1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ATHL1-1:13
5.0 lnc-ATHL1-1:13
5.1 lnc-OR51M1-141:13
5.2 lnc-PGGHG-1:13