Transcript: lnc-PGM1-1:4

Basic information

LNCipedia transcript ID: lnc-PGM1-1:4 
LNCipedia gene ID: lnc-PGM1-1
Location (hg38): chr1:63548980-63550636
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1657 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT003692; NR_002771
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.801 non-coding 
CPAT coding probability 0.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PGM1-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DLEU2L-1:1
4.0 lnc-DLEU2L-1:1
4.1 lnc-DLEU2L-1:1
5.0 lnc-DLEU2L-1:1
5.1 lnc-PGM1-1:2
5.2 lnc-PGM1-1:4