Transcript: lnc-PGPEP1L-5:1

Basic information

LNCipedia transcript ID: lnc-PGPEP1L-5:1 
LNCipedia gene ID: lnc-PGPEP1L-5
Location (hg38): chr15:99241387-99249558
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 560 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT050859
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 7.7697 non-coding 
CPAT coding probability 0.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PGPEP1L-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PGPEP1L-4:2
4.0 lnc-PGPEP1L-5:1
4.1 lnc-PGPEP1L-5:1
5.0 lnc-PGPEP1L-5:1
5.1 lnc-CIB1-90:1
5.2 lnc-PGPEP1L-5:1