Transcript: lnc-PGPEP1L-7:1

Basic information

LNCipedia transcript ID: lnc-PGPEP1L-7:1 
LNCipedia gene ID: lnc-PGPEP1L-7
Ensembl Gene ID: ENSG00000274312
Ensembl Transcript ID: ENST00000622210
Location (hg38): chr15:98319687-98320237
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 551 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000622210.1
Alternative gene names: ENSG00000274312.1; RP11-167B3.2; AC015722.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -189.1392 non-coding 
CPAT coding probability 0.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PGPEP1L-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-FAM169B-5:1
4.1 lnc-FAM169B-5:1
5.0 lnc-FAM169B-5:1
5.1 lnc-CIB1-82:1
5.2 lnc-PGPEP1L-7:1