Transcript: lnc-PGS1-1:13

Basic information

LNCipedia transcript ID: lnc-PGS1-1:13 
LNCipedia gene ID: lnc-PGS1-1
Location (hg38): chr17:78360282-78376635
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 8609 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000266970.1|ENCT00000178734.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 33.093 non-coding 
CPAT coding probability 46.52% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PGS1-1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PGS1-1:13
5.0 lnc-PGS1-1:13
5.1 lnc-ZACN-52:4
5.2 lnc-PGS1-1:13