Transcript: lnc-PHF14-14:11

Basic information

LNCipedia transcript ID: lnc-PHF14-14:11 
LNCipedia gene ID: lnc-PHF14-14
Location (hg38): chr7:11252630-11256077
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3382 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT119212; FPKM1_group_29112_transcript_6
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -65.8302 non-coding 
CPAT coding probability 11.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PHF14-14:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PHF14-1:9
4.0 lnc-PHF14-14:11
4.1 lnc-PHF14-14:11
5.0 lnc-PHF14-14:11
5.1 lnc-AHR-71:15
5.2 lnc-PHF14-14:11