Transcript: lnc-PHLPP1-2:1

Basic information

LNCipedia transcript ID: lnc-PHLPP1-2:1 
LNCipedia gene ID: lnc-PHLPP1-2
Ensembl Gene ID: ENSG00000283125
Ensembl Transcript ID: ENST00000634673
Location (hg38): chr18:63207622-63208168
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 547 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000634673.1
Alternative gene names: ENSG00000283125.1; RP11-299P2.2; AC022726.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -330.6754 non-coding 
CPAT coding probability 0.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PHLPP1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-PHLPP1-2:1
4.1 lnc-PHLPP1-2:1
5.0 lnc-PHLPP1-2:1
5.1 lnc-WDR7-76:1
5.2 lnc-PHLPP1-2:1