Transcript: lnc-PI16-2:3

Basic information

LNCipedia transcript ID: lnc-PI16-2:3 
LNCipedia gene ID: lnc-PI16-2
Location (hg38): chr6:37028609-37028877
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 269 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr6_4389_+
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 3.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PI16-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COX6A1P2-2:1
4.0 lnc-COX6A1P2-2:1
4.1 lnc-COX6A1P2-2:1
5.0 lnc-COX6A1P2-2:1
5.1 lnc-PI16-4:1
5.2 lnc-PI16-2:3