Transcript: lnc-PID1-5:1

Basic information

LNCipedia transcript ID: lnc-PID1-5:1 
LNCipedia gene ID: lnc-PID1-5
Location (hg38): chr2:229281084-229283226
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2143 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000051797.1|ENCT00000254567.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -120.4371 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PID1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PID1-5:1
5.0 lnc-PID1-5:1
5.1 lnc-HTR2B-24:1
5.2 lnc-PID1-5:1