Transcript: lnc-PIEZO2-2:6

Basic information

LNCipedia transcript ID: lnc-PIEZO2-2:6 
LNCipedia gene ID: lnc-PIEZO2-2
Location (hg38): chr18:11471229-11490671
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 257 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026676; NONHSAT057305
Alternative gene names: XLOC_012769; linc-FAM38B-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -92.6393 non-coding 
CPAT coding probability 5.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PIEZO2-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-677O4.1.1-1:2
3.1 lnc-RP11-677O4.1.1-2:2
4.0 lnc-RP11-677O4.1.1-2:2
4.1 lnc-RP11-677O4.1.1-2:2
5.0 lnc-RP11-677O4.1.1-2:2
5.1 lnc-SMAD2-281:2
5.2 lnc-PIEZO2-2:6