Transcript: lnc-PIEZO2-6:1

Basic information

LNCipedia transcript ID: lnc-PIEZO2-6:1 
LNCipedia gene ID: lnc-PIEZO2-6
Location (hg38): chr18:10371399-10372543
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 373 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00026416
Alternative gene names: XLOC_012761; linc-PPP4R1-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -93.6677 non-coding 
CPAT coding probability 2.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PIEZO2-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PIEZO2-6:1
3.1 lnc-PIEZO2-6:1
4.0 lnc-PIEZO2-6:1
4.1 lnc-PIEZO2-6:1
5.0 lnc-PIEZO2-6:1
5.1 lnc-SMAD2-298:2
5.2 lnc-PIEZO2-6:1