Transcript: lnc-PIGB-1:4

Basic information

LNCipedia transcript ID: lnc-PIGB-1:4 
LNCipedia gene ID: lnc-PIGB-1
Location (hg38): chr15:55056749-55092121
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 430 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT043978; FPKM1_group_10219_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 9.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PIGB-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PIGB-1:4
4.0 lnc-PIGB-1:4
4.1 lnc-PIGB-1:4
5.0 lnc-PIGB-1:4
5.1 lnc-MAP2K1-150:2
5.2 lnc-PIGB-1:4